Publications

June 7, 2022
Publications
A genome-wide atlas of antibiotic susceptibility targets and pathways to tolerance
Dmitry Leshchiner, Federico Rosconi, Bharathi Sundaresh, Emily Rudmann, Luisa Maria Nieto Ramirez, Andrew T. Nishimoto, Stephen J. Wood, Bimal Jana, Noemí Buján, Kaicheng Li, Jianmin Gao, Matthew Frank, Stephanie M. Reeve, Richard E. Lee, Charles O. Rock, Jason W. Rosch & Tim van Opijnen

May 31, 2022
Publications
Development of a Dual-Fluorescent-Reporter System in Clostridioides difficile Reveals a Division of Labor between Virulence and Transmission Gene Expression
M. Lauren Donnelly, Shailab Shrestha, John W. Ribis, Pola Kuhn, Maria Krasilnikov, Carolina Alves Feliciano, Aimee Shen. mSphere. 2022 May 31;e0013222.

May 26, 2022
Publications
Immunosuppression broadens evolutionary pathways to drug resistance and treatment failure during Acinetobacter baumannii pneumonia in mice
Wenwen Huo, Lindsay M. Busch, Juan Hernandez-Bird, Efrat Hamami, Christopher W. Marshall, Edward Geisinger, Vaughn S. Cooper, Tim van Opijnen, Jason W. Rosch & Ralph R. Isberg

May 1, 2022
Publications
Public availability of HIV-1 drug resistance sequence and treatment data: a systematic review
Soo-Yon Rhee, Seble G Kassaye, Michael R Jordan, Vinie Kouamou, David Katzenstein, Robert W Shafer

April 28, 2022
Publications
Molecular Regulatory Mechanisms Drive Emergent Pathogenetic Properties of Neisseria gonorrhoeae
Ashwini Sunkavalli, Ryan McClure, Caroline Genco. Microorganisms. 2022 Apr 28;10(5):922.

April 14, 2022
Publications
Drinking water chlorination has minor effects on the intestinal flora and resistomes of Bangladeshi children
Maya L. Nadimpalli, Val F. Lanza, Maria Camila Montealegre, Sonia Sultana, Erica R. Fuhrmeister, Colin J. Worby, Lisa Teichmann, Lea Caduff, Jenna M. Swarthout, Yoshika S. Crider, Ashlee M. Earl, Joe Brown, Stephen P. Luby, Mohammad Aminul Islam, Timothy R. Julian & Amy J. Pickering. Nat Microbiol. 2022 May;7(5):620-629. Epub 2022 Apr 14.

April 1, 2022
Publications
Impact of Diagnostic Stewardship Interventions on Clostridiodes difficile test ordering practices and results
Joshua Khuvis, Majd Alsoubani, Angie Mae Rodday, Shira Doron. Clin Biochem. 2022 Apr 1;S0009-9120(22)00097-2. Online ahead of print.

April 1, 2022
Publications
Types and Functions of Heterogeneity in Mycobacteria
Eun Seon Chung, William C Johnson , Bree B Aldridge. Nat Rev Microbiol. 2022 Apr 1.

March 28, 2022
Publications
Spatial relationships of intra-lesion heterogeneity in Mycobacterium tuberculosis microenvironment, replication status, and drug efficacy
Richard C. Lavin, Shumin Tan. PLoS Pathog. 2022 Mar 28;18(3):e1010459.

March 15, 2022
Publications
Antiphospholipid autoantibodies in Lyme disease arise after scavenging of host phospholipids by Borrelia burgdorferi
Peter J Gwynne, Luke H Clendenen, Siu-Ping Turk, Adriana R Marques, Linden T Hu. J Clin Invest. 2022 Mar 15;132(6):e152506.

February 25, 2022
Publications
The prevalence of pre-treatment and acquired HIV drug resistance in Vietnam: a nationally representative survey, 2017-2018
Int AIDS Soc. 2022 Feb;25(2):e25857.

2022
Publications
Pretreatment Human Immunodeficiency Virus (HIV) Drug Resistance Among Treatment-Naive Infants Newly Diagnosed With HIV in 2016 in Namibia: Results of a Nationally Representative Study
Michael R Jordan, Leonard Bikinesi, Laimi Ashipala, Nicholus Mutenda, Mary Brantuo, Gillian Hunt, Andreas Shiningavamwe, Gram Mutandi, Anita Beukes, Suzanne Beard, Katherine Battey, Eric J Dziuban, Elliot Raizes, Paul Adjei, Alice Tang, Amalia Giron, Steven Y Hong. Open Forum Infectious Diseases, Volume 9, Issue 5, May. 2022, ofac102.

